fix: restore broken links

docs/README.org

@@ -18,13 +18,5 @@ keys or whose remap feature is kind of buggy with some keys, such as
 the «é» placed where the «w» is on a Qwerty layout (I’m looking at
 you, HoloCure).
 
-** Installation
-If you wish to install my dotfiles and you are on ArchLinux, you can
-follow the [[file:bootstrap.org][bootstrap]] page where you can find a walkthrough of how I
-configure my environment and what I install. If you have [[https://github.com/TheLocehiliosan/yadm][YADM]]
-installed, you can even execute =yadm bootstrap= to execute it after
-cloning my repo with =yadm clone
-https://labs.phundrak.com/phundrak/dotfiles.git=.
-
 ** License
 See [[https://labs.phundrak.com/phundrak/dotfiles/src/branch/master/LICENSE.org][the repository’s license file]].

docs/deprecated/awesome.org

@@ -1031,7 +1031,7 @@ displayed as ~0~). Here is what the possible actions are:
 In this category you will find other keybindings that do not fit in other
 categories. For now, the only keybinding that is in this category is for
 toggling the touchpad’s tapping ability. This is linked to a special script I
-wrote [[file:bin.org::#Toggle_touchpad_tapping-23348b00][here]].
+wrote [[file:./scripts.md#toggle-touchpad-tapping][here]].
 #+NAME: sc-misc
 | Key                | Modifiers | Lambda? | Action    | What it does            | Group |
 |--------------------+-----------+---------+-----------+-------------------------+-------|

docs/deprecated/bootstrap.org

@@ -334,7 +334,7 @@ Some visual packages:
 | nordic-theme-git               | Nord theme for GTK                  |
 | noto-fonts-emoji               | Font with emojis                    |
 | otf-ipafont                    | Japanese font                       |
-| picom                          | See [[file:picom.org]]                  |
+| picom                          | See [[file:/picom.org][my Picom config]]                 |
 | powerline-fonts                | Powerline fonts                     |
 | siji-git                       | Siji font                           |
 | ttf-arphic-uming               | CJK font Ming style                 |
@@ -824,7 +824,7 @@ end
 #+END_SRC
 
 *** Symlink some system config files
-Let’s symlink the ~plock~ script ([[file:bin.org::#Lock-635fcb38][source here]]) to ~/usr/bin~ so ~xss-lock~
+Let’s symlink the ~plock~ script ([[file:../scripts.md#plock][source here]]) to ~/usr/bin~ so ~xss-lock~
 can find it.
 #+BEGIN_SRC fish
 sudo ln -s ~/.local/bin/plock /usr/bin/plock
@@ -838,7 +838,7 @@ mkdir -p ~/fromGIT
 
 **** Reveal.JS
 I sometimes use Reveal.JS to make presentations, and I set its
-location in my [[file:emacs.org][Emacs config]] to be in =~/fromGIT=, so let’s clone it
+location in my [[file:../emacs/index.md][Emacs config]] to be in =~/fromGIT=, so let’s clone it
 there.
 #+BEGIN_SRC fish
 printf "\n# Install Reveal.JS ###########################################################\n\n"

docs/emacs/custom-elisp.org

@@ -40,7 +40,7 @@ APPEND and COMPARE-FN, see `add-to-list'."
 #+end_src
 
 ** Generate and insert random passwords
-These functions got replaced by my custom package, see [[file:./misc.md#password-generator][Password
+These functions got replaced by my custom package, see [[file:packages/misc.md#password-generator][Password
 generator]].
 
 ** Handle new windows

docs/emacs/index.org

@@ -80,24 +80,24 @@ block.
 ** Loading All Configuration Modules
 
 #+name: emacs-modules
-| Module Name              | Config Page                      |
+| Module Name            | Config Page                      |
-|--------------------------+----------------------------------|
+|------------------------+----------------------------------|
-| =basic-config.el=          | [[file:./basic-config.org][Basic Configuration]]              |
+| =basic-config.el=        | [[file:./basic-config.org][Basic Configuration]]              |
-| =custom-elisp.el=          | [[file:./custom-elisp.org][Custom Elisp]]                     |
+| =custom-elisp.el=        | [[file:./custom-elisp.org][Custom Elisp]]                     |
-| =package-manager.el=       | [[file:./package-manager.org][Package Manager]]                  |
+| =package-manager.el=     | [[file:./package-manager.org][Package Manager]]                  |
-| =keybinding-managemers.el= | [[file:./keybinding-managemers.org][Keybinding Managers]]              |
+| =keybinding-managers.el= | [[file:keybinding-managers.org][Keybinding Managers]]              |
-| =applications.el=          | [[file:./packages/applications.org][Packages — Applications]]          |
+| =applications.el=        | [[file:./packages/applications.org][Packages — Applications]]          |
-| =autocompletion.el=        | [[file:./packages/autocompletion.org][Packages — Autocompletion]]        |
+| =autocompletion.el=      | [[file:./packages/autocompletion.org][Packages — Autocompletion]]        |
-| =editing.el=               | [[file:./packages/editing.org][Packages — Editing]]               |
+| =editing.el=             | [[file:./packages/editing.org][Packages — Editing]]               |
-| =emacs-builtin.el=         | [[file:./packages/emacs-builtin.org][Packages — Emacs Built-ins]]       |
+| =emacs-builtin.el=       | [[file:./packages/emacs-builtin.org][Packages — Emacs Built-ins]]       |
-| =exwm.el=                  | [[file:./packages/exwm.org][Packages — EXWM]]                  |
+| =exwm.el=                | [[file:./packages/exwm.org][Packages — EXWM]]                  |
-| =helpful.el=               | [[file:./packages/helpful.org][Packages — Making My Life Easier]] |
+| =helpful.el=             | [[file:./packages/helpful.org][Packages — Making My Life Easier]] |
-| =latex.el=                 | [[file:./packages/latex.org][Packages — LaTeX]]                 |
+| =latex.el=               | [[file:./packages/latex.org][Packages — LaTeX]]                 |
-| =misc.el=                  | [[file:./packages/misc.org][Packages — Misc]]                  |
+| =misc.el=                | [[file:./packages/misc.org][Packages — Misc]]                  |
-| =org.el=                   | [[file:./packages/org.org][Packages — Org Mode]]              |
+| =org.el=                 | [[file:./packages/org.org][Packages — Org Mode]]              |
-| =programming.el=           | [[file:./packages/programming.org][Packages — Programming]]           |
+| =programming.el=         | [[file:./packages/programming.org][Packages — Programming]]           |
-| =visual-config.el=         | [[file:./packages/visual-config.org][Packages — Visual Configuration]]  |
+| =visual-config.el=       | [[file:./packages/visual-config.org][Packages — Visual Configuration]]  |
-| =keybindings.el=           | [[file:./keybindings.org][Keybindings]]                      |
+| =keybindings.el=         | [[file:./keybindings.org][Keybindings]]                      |
 
 #+name: generate-modules
 #+begin_src emacs-lisp :tangle no :cache yes :var modules=emacs-modules :exports none

docs/emacs/packages/applications.org

@@ -498,7 +498,7 @@ configuration for the ~mu4e~ package itself.
 Quick sidenote: on Arch Linux, you’ll need to install either ~mu~ or
 ~mu-git~ from the AUR in order to use mu4e. I also have a ~.desktop~ file
 to make it possible to open mu4e directly from my program picker. It
-uses the shell script ~emacsmail~ I’ve written [[file:bin.org::#Emacsmail-afffb7cd][here]].
+uses the shell script ~emacsmail~ I’ve written [[file:./scripts.md#emacsmail][here]].
 #+header: :mkdirp yes
 #+begin_src conf-desktop :tangle ~/.local/share/applications/mu4e.desktop
 [Desktop Entry]
@@ -1092,7 +1092,7 @@ notification system, and I’ll activate the modeline notification.
 EMMS, also known as the /Emacs MultiMedia System/, allows the user to
 interact through Emacs with multimedia elements such as music and
 videos. My main use for it will be for music with MPD (see its
-configuration [[file:mpd.org][here]]).
+configuration [[file:/mpd.md][here]]).
 #+begin_src emacs-lisp
 (use-package emms
   :defer t

docs/emacs/packages/exwm.org

@@ -224,7 +224,7 @@ mode), except for ~s-RET~ which opens an eshell terminal.
 #+end_src
 
 A couple of commands are also automatically executed through my
-~autostart~ script written [[file:bin.org::#Autostart-a99e99e7][here]].
+~autostart~ script written [[file:/scripts.md#autostart][here]].
 #+name: exwm-autostart
 #+begin_src emacs-lisp :tangle no
 (exwm/run-in-background "autostart")

docs/emacs/packages/programming.org

@@ -746,7 +746,7 @@ installed this major mode.
 #+end_src
 
 *** Shells
-Aside from Eshell, my main shell on my machine is fish (see my [[file:fish.org][fish
+Aside from Eshell, my main shell on my machine is fish (see my [[file:/fish.md][fish
 config]]), therefore I need a mode for it.
 #+begin_src emacs-lisp
 (use-package fish-mode
@@ -900,7 +900,7 @@ when entering ~lisp-mode~.
 #+end_src
 
 Sly enables some deep interactivity between Emacs and a CommonLisp
-application running the Slynk backend. For an example, see [[file:stumpwm.org::#Utilities-Sly-kkok6oi0yaj0][my Sly
+application running the Slynk backend. For an example, see [[file:/stumpwm/utilities.md#sly][my Sly
 configuration for StumpWM]].
 #+begin_src emacs-lisp
 (use-package sly

docs/fish.org

@@ -538,7 +538,7 @@ abbr webcam 'devour mpv --demuxer-lavf-format=video4linux2 --demuxer-lavf-o-set=
 
 **** Sudo
 First, I make it so that ~sudo~ comes with the ~-A~ switch in order to call my
-custom graphical script for getting my password (see [[file:bin.org::#Askpass-d0d7a8c0][askpass]]). I also made it so
+custom graphical script for getting my password (see [[file:./scripts.md#askpass][askpass]]). I also made it so
 ~please~ is an equivalent to ~sudo -A~ as a joke.
 #+BEGIN_SRC fish
 abbr please 'sudo -A'

docs/mpd.org

@@ -11,8 +11,7 @@ It can be manipulated by various front-end applications, such as the
 command-line utility ~mpc~, TUI ~ncmpcpp~, or GUI ~cantata~. In my case, I
 use mainly ~ncmpcpp~ and Emacs’ EMMS.
 
-On my computer, MPD runs as a user daemon, as seen in [[file:bootstrap.org::#Execute_bootstrap-Enable_some_services-Mpd-f0f5b9b7][my bootstrap
+On my computer, MPD runs as a user daemon.
-file here]].
 
 ** Required Parameters
 MPD requires a few compulsory parameters that we will see below.

docs/stumpwm/index.org

@@ -9,11 +9,11 @@
 *** What is StumpWM?
 [[https://stumpwm.github.io/][StumpWM]] is a tiling window manager inheriting from [[http://www.nongnu.org/ratpoison/][RatPoison]], written
 entirely in [[https://common-lisp.net/][Common Lisp]] and compiled with [[http://www.sbcl.org/][SBCL]]. While it is not a
-dynamic tiling window manager like [[file:Deprecated/awesome.org][Awesome]] is, its ability of managing
+dynamic tiling window manager like [[file:/deprecated/awesome.md][Awesome]] is, its ability of managing
 windows in frames and using keychords with keymaps like Emacs does is
 a huge plus for me, not to mention the fact its configuration file is
 written in Common Lisp, a general programming language, a bit like
-Awesome. This makes it an [[file:Deprecated/i3.org][i3]] on steroids, sort of. It also uses a lot
+Awesome. This makes it an [[file:/deprecated/i3.md][i3]] on steroids, sort of. It also uses a lot
 of Emacs’ concepts, which is great for an Emacs user such as myself.
 
 *** Why not EXWM then?

docs/stumpwm/keybindings.org

@@ -525,7 +525,7 @@ with Emacs’ buffers.
 My music is managed through MPD, and I often use ~playerctl~ commands in
 order to interact with it without any GUI application. So, we’ll see a
 lot of its usage here, and numerous commands used here come from the
-~mpd~ minor mode loaded [[file:./stumpwm.md#init-file][above]].
+~mpd~ minor mode loaded [[file:init.md][in the init file]].
 
 First, let’s declare an interactive keymap in order to easily change
 several times in a row either the current song playing or the volume

docs/stumpwm/mode-line.org

@@ -97,7 +97,7 @@ formatter is U+E082, which symbolizes the CPU.
 *** Generating the Mode-Line
 We can indicate what to display in our modeline. Each formatter will
 be separated by a Powerline separator with the code point ~0xE0B0~ in
-the font I am using (see [[file:./stumpwm.md#fonts][Fonts]]).
+the font I am using (see [[file:theme.md#fonts][Theme » Fonts]]).
 
 #+name: modeline-format
 #+caption: Formatters for the modeline